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Found 3 Skills
Biological data toolkit. Sequence analysis, alignments, phylogenetic trees, diversity metrics (alpha/beta, UniFrac), ordination (PCoA), PERMANOVA, FASTA/Newick I/O, for microbiome analysis.
Python toolkit for computational biology. Use when asked to "parse FASTA", "read GenBank", "query NCBI", "run BLAST", "analyze protein structure", "build phylogenetic tree", or work with biological sequences. Handles sequence I/O, database access, alignments, structure analysis, and phylogenetics.
Library for bioinformatics and community ecology statistics. Provides data structures and algorithms for sequences, alignments, phylogenetics, and diversity analysis. Essential for microbiome research and ecological data science. Use for alpha/beta diversity metrics, ordination (PCoA), phylogenetic trees, sequence manipulation (DNA/RNA/Protein), distance matrices, PERMANOVA, and community ecology analysis.