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All Skills

Total 32,491 skills

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Showing 12 of 32491 skills

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Data Processingaminoanalytica/amina-skil...

scikit-bio

Python bioinformatics library for sequence manipulation, alignments, phylogenetics, diversity metrics (Shannon, UniFrac), ordination (PCoA, CCA), statistical tests (PERMANOVA, Mantel), and biological file format I/O.

🇺🇸|EnglishTranslated
6
Data Processingaminoanalytica/amina-skil...

chembl-database

Query the ChEMBL database for bioactive compounds, drug targets, and bioactivity data. Use this skill when searching for small molecules, finding inhibitors for protein targets, or analyzing drug mechanisms of action.

🇺🇸|EnglishTranslated
6
Tools & Utilitiesaminoanalytica/amina-skil...

amina-init

Foundation skill for autonomous protein engineering via the Amina CLI. Use at session start or after conversation compacting when working with AminoAnalytica's Amina CLI or when you need help using the Amina CLI to do protein engineering tasks like: protein design, structure prediction, binder design, docking, molecular dynamics, enzyme engineering, or any mention of Amina/amina-cli.

🇺🇸|EnglishTranslated
6
Data Processingaminoanalytica/amina-skil...

rdkit

Python cheminformatics library for molecular manipulation and analysis. Parse SMILES/SDF/MOL formats, compute descriptors (MW, LogP, TPSA), generate fingerprints (Morgan, MACCS), perform substructure queries with SMARTS, create 2D/3D geometries, calculate similarity, and run chemical reactions.

🇺🇸|EnglishTranslated
6
AI & Machine Learningaminoanalytica/amina-skil...

alphafold-database

Query and retrieve AI-predicted protein structures from DeepMind's AlphaFold database. Fetch structures via UniProt accession, interpret pLDDT/PAE confidence scores, and access bulk proteome data for structural biology workflows.

🇺🇸|EnglishTranslated
6
1 scripts/Checked
Data Processingaminoanalytica/amina-skil...

pdb-database

Query and retrieve protein/nucleic acid structures from RCSB PDB. Use when you need to search the PDB database for structures or metadata. Supports text, sequence, and structure-based searches, coordinate downloads, and metadata retrieval for structural biology workflows.

🇺🇸|EnglishTranslated
6
Data Processingaminoanalytica/amina-skil...

uniprot-database

Query and retrieve protein sequences, annotations, and functional data from UniProt. Supports text search, ID mapping between databases, batch downloads, and access to Swiss-Prot (reviewed) and TrEMBL (predicted) entries.

🇺🇸|EnglishTranslated
6
Tools & Utilitiesaminoanalytica/amina-skil...

pymol

Control PyMOL molecular visualization through Claude Code. Use when asked to "visualize protein", "render structure", "show cartoon", "color by chain", "ray trace", "set up pymol", "install pymol", or work with molecular graphics. Handles setup, visualization commands, and publication-quality figure generation.

🇺🇸|EnglishTranslated
6
1 scripts/Attention
Tools & Utilitiesaminoanalytica/amina-skil...

biorxiv-database

Search and retrieve preprints from bioRxiv. Use when asked to "search bioRxiv", "find preprints", "look up bioRxiv papers", or retrieve life sciences literature.

🇺🇸|EnglishTranslated
6
1 scripts/Checked
AI & Machine Learningd-o-hub/rust-self-learnin...

loop-agent

Execute workflow agents iteratively for refinement and progressive improvement until quality criteria are met. Use when tasks require repetitive refinement, multi-iteration improvements, progressive optimization, or feedback loops until convergence.

🇺🇸|EnglishTranslated
6
AI & Machine Learningcclank/lanshu-waytovideo

jianying-video-gen

Automatically generate AI videos using the Seedance 2.0 model of Jianying (also called Xiaoyunque). It supports three modes: Text to Video (T2V), Image to Video (I2V) and Reference Video to Video (V2V). This skill is applicable when users need to generate AI videos, create short films with the Seedance model, or perform style conversion based on reference images/videos. Pre-configuration of the cookies.json login credential is required.

🇨🇳|ChineseTranslated
6
1 scripts/Attention
Mobile Developmentdpearson2699/swift-ios-sk...

photos-camera-media

Implement, review, or improve photo picking, camera capture, and media handling in iOS apps. Use when working with PhotosPicker, PHPickerViewController, camera capture sessions (AVCaptureSession), photo library access, image loading and display, video recording, or media permissions. Trigger for any task involving selecting photos from the library, taking pictures, recording video, processing images, or handling photo/camera privacy permissions in Swift apps.

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6
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